net.sourceforge.cilib.bioinf.rnaprediction
Class RNAVelocityUpdate

java.lang.Object
  net.sourceforge.cilib.bioinf.rnaprediction.RNAVelocityUpdate

All Implemented Interfaces:

Serializable, VelocityUpdateStrategy, Cloneable

public class RNAVelocityUpdate
extends Object
implements VelocityUpdateStrategy

Author:

mneethling

See Also:

Serialized Form

Constructor Summary

RNAVelocityUpdate()

RNAVelocityUpdate(RNAVelocityUpdate copy)

Method Summary

RNAVelocityUpdate	getClone() Clone the VelocityUpdateStrategy object.
void	setAddRandomProbability(double addRandomProbability)
void	setCloseProbability(double closeProbability)
void	setOpenProbability(double openProbability)
void	updateControlParameters(Particle particle) Update the needed control parameters for the VelocityUpdate, if needed.
void	updateVelocity(Particle particle) Perform the velocity update operation on the specified Particle.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

RNAVelocityUpdate

public RNAVelocityUpdate()

RNAVelocityUpdate

public RNAVelocityUpdate(RNAVelocityUpdate copy)

Method Detail

getClone

public RNAVelocityUpdate getClone()

Description copied from interface: VelocityUpdateStrategy

Clone the VelocityUpdateStrategy object.

Specified by:

getClone in interface VelocityUpdateStrategy

Specified by:

getClone in interface Cloneable

Returns:

A cloned VelocityUpdateStrategy

See Also:

Object.clone()

updateVelocity

public void updateVelocity(Particle particle)

Description copied from interface: VelocityUpdateStrategy

Perform the velocity update operation on the specified Particle.

Specified by:

updateVelocity in interface VelocityUpdateStrategy

Parameters:

particle - The Particle to apply the operation on.

updateControlParameters

public void updateControlParameters(Particle particle)

Description copied from interface: VelocityUpdateStrategy

Update the needed control parameters for the VelocityUpdate, if needed.

Specified by:

updateControlParameters in interface VelocityUpdateStrategy

Parameters:

particle - The particle for whom the VelocityUpdateStrategy parameters need to be updated.

setCloseProbability

public void setCloseProbability(double closeProbability)

Parameters:

closeProbability - The closeProbability to set.

setOpenProbability

public void setOpenProbability(double openProbability)

Parameters:

openProbability - The openProbability to set.

setAddRandomProbability

public void setAddRandomProbability(double addRandomProbability)