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| Class Summary | |
|---|---|
| Efn2RNAFitness | |
| GreedyRNAFolder | |
| HydrogenBondFitness | |
| MathewsFitness | |
| MethewsFitness | |
| NucleotidePair | |
| NucleotideString | |
| RNAAccuracyMeasurement | TODO: Complete this javadoc. |
| RNAConformation | |
| RNAFitness | |
| RNAFolder | |
| RNAInitialiser | |
| RNAOptimisationProblem | |
| RNAParticle | |
| RNAPSO | |
| RNAStem | |
| RNAStructureMeasurement | |
| RNAVelocityUpdate | |
| SimpleRNAFitness | |
| StemConflictTable | TODO: Compelte this javadoc. |
| StemConstraintChecker | |
| StemGenerator | |
| TestStemGenerator | TODO: Complete this javadoc and potentially remove this object. |
| ViennaRNAFitness | |
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