net.sourceforge.cilib.bioinf.rnaprediction
Class HydrogenBondFitness

java.lang.Object
  net.sourceforge.cilib.measurement.single.Fitness
      net.sourceforge.cilib.bioinf.rnaprediction.RNAFitness
          net.sourceforge.cilib.bioinf.rnaprediction.HydrogenBondFitness

All Implemented Interfaces:

Serializable, Measurement, Cloneable

public class HydrogenBondFitness
extends RNAFitness

Author:

mneethling

See Also:

Serialized Form

Field Summary

Fields inherited from class net.sourceforge.cilib.bioinf.rnaprediction.RNAFitness

nucleotides

Constructor Summary

HydrogenBondFitness()

HydrogenBondFitness(HydrogenBondFitness copy)

Method Summary

HydrogenBondFitness	getClone() Create a cloned copy of the current object and return it.
Double	getRNAFitness(RNAConformation stems)

Methods inherited from class net.sourceforge.cilib.measurement.single.Fitness

getDomain, getValue

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

HydrogenBondFitness

public HydrogenBondFitness()

HydrogenBondFitness

public HydrogenBondFitness(HydrogenBondFitness copy)

Method Detail

getClone

public HydrogenBondFitness getClone()

Description copied from class: Fitness

Create a cloned copy of the current object and return it. In general the created copy will be a deep copy of the provided instance. As a result this operation an be quite expensive if used incorrectly.

Specified by:

getClone in interface Measurement

Specified by:

getClone in interface Cloneable

Specified by:

getClone in class RNAFitness

Returns:

An exact clone of the current object instance.

See Also:

Object.clone()

getRNAFitness

public Double getRNAFitness(RNAConformation stems)

Specified by:

getRNAFitness in class RNAFitness